UNIT UNDER CONSTRUCTION

File Processing and Biological File Formats

Introducing Perl programming to work with files

  1. Opening and Reading Files
  2. Writing To Files
  3. Changing File Names
  4. Disk Use Utility
  5. Redirecting Output To A File
  6. Loading Multiple Files
  7. Operations On Directories
  8. Counting Nucleotides
  9. Generating Tallies
  10. Recognizing Numbers
  11. Integer Validation
  12. Matching Portions of Patterns
  1. Simple Flat File Format
  2. Translate Flat File to Balanced Tag Format
  3. Introduction to Prosite
  4. More Parsing of Prosite Files
  5. Introduction To Genbank
  6. More Manipulation of Genbank Files
  7. Fun With Genbank Files
  8. Converting Genbank Files to Web Pages
  9. Simple Protein Database
  10. More Parsing of Simple Protein Database
  11. FASTA Format
  12. Form Letter Using Regular Expressions